• paper: https://www.biorxiv.org/content/10.1101/2024.10.03.616013v1
  • code : https://github.com/emanuelepitino/Stamp_V4
  • takeaway:
    • no special analysists no sequencing required.
    • RNA vs protein comparison was incomplete
    • How the trajectory applied w/ less stringent filtering affect the performance

image

  STAMP scRNA Spatial
Diss.cells high low high
Cost FixedCost Scaled w/ cells Fixed cost
Genes Limitted to panel of known whole transcriptome Curated panel